Selected publications in 2009

FPPI: Fusarium graminearum protein-protein interaction database.
Zhao XM, Zhang XW, Tang WH, Chen L.
Journal of Proteome Research (2009)

F. graminearum protein−protein interaction (FPPI) database provides comprehensive information of protein−protein interactions (PPIs) of F. graminearum predicted based on both interologs from several PPI databases of seven species and domain−domain interactions experimentally determined based on protein structures.

Automatic modeling of signaling pathways by network flow model.
Zhao XM, Wang RS, Chen L, Aihara K.
Journal of Bioinformatics and Computational Biology (2009)

In this paper, we present a novel method for modeling signaling pathways from PPI networks automatically.